IL_5OT7_181
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCCACUACAAAGCGAUG*CUAAUCGCAAAAAGGUGGG
- Length
- 36 nucleotides
- Bulged bases
- 5OT7|1|1|C|1246, 5OT7|1|1|U|1257, 5OT7|1|1|U|1278, 5OT7|1|1|A|1280, 5OT7|1|1|U|1281, 5OT7|1|1|C|1282, 5OT7|1|1|A|1286, 5OT7|1|1|U|1292
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|1|C|1242
5OT7|1|1|C|1243
5OT7|1|1|C|1244
5OT7|1|1|A|1245
5OT7|1|1|C|1246
5OT7|1|1|U|1247
5OT7|1|1|A|1248
5OT7|1|1|C|1249
5OT7|1|1|A|1250
5OT7|1|1|A|1251
5OT7|1|1|A|1252
5OT7|1|1|G|1253
5OT7|1|1|C|1254
5OT7|1|1|G|1255
5OT7|1|1|A|1256
5OT7|1|1|U|1257
5OT7|1|1|G|1258
*
5OT7|1|1|C|1277
5OT7|1|1|U|1278
5OT7|1|1|A|1279
5OT7|1|1|A|1280
5OT7|1|1|U|1281
5OT7|1|1|C|1282
5OT7|1|1|G|1283
5OT7|1|1|C|1284
5OT7|1|1|A|1285
5OT7|1|1|A|1286
5OT7|1|1|A|1287
5OT7|1|1|A|1288
5OT7|1|1|A|1289
5OT7|1|1|G|1290
5OT7|1|1|G|1291
5OT7|1|1|U|1292
5OT7|1|1|G|1293
5OT7|1|1|G|1294
5OT7|1|1|G|1295
Current chains
- Chain 1
- 16S Ribosomal RNA
Nearby chains
- Chain B
- 30S ribosomal protein S3
- Chain F
- 30S ribosomal protein S7
- Chain H
- 30S ribosomal protein S9
- Chain I
- 30S ribosomal protein S10
- Chain L
- 30S ribosomal protein S13
- Chain M
- 30S ribosomal protein S14 type Z
- Chain T
- 30S ribosomal protein Thx
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