IL_5OT7_184
3D structure
- PDB id
- 5OT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation factor G-ribosome complex captures in the absence of inhibitors.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GG*UAC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5OT7_184 not in the Motif Atlas
- Homologous match to IL_9DFE_008
- Geometric discrepancy: 0.2335
- The information below is about IL_9DFE_008
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.8
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 43
Unit IDs
5OT7|1|4|G|272|||D
5OT7|1|4|G|272|||E
*
5OT7|1|4|U|363|||E
5OT7|1|4|A|363|||F
5OT7|1|4|C|364
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain 7
- 50S ribosomal protein L9
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