IL_5OT7_191

3D structure

PDB id

5OT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation factor G-ribosome complex captures in the absence of inhibitors.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGGGAGCC*GGCGCCGGUGAAAUACCAC

Length

28 nucleotides

Bulged bases

5OT7|1|4|A|2169, 5OT7|1|4|A|2170, 5OT7|1|4|A|2176

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OT7|1|4|G|2121
5OT7|1|4|U|2122
5OT7|1|4|G|2123
5OT7|1|4|G|2124
5OT7|1|4|G|2125
5OT7|1|4|A|2126
5OT7|1|4|G|2127
5OT7|1|4|C|2128
5OT7|1|4|C|2129
*
5OT7|1|4|G|2159
5OT7|1|4|G|2160
5OT7|1|4|C|2161
5OT7|1|4|G|2162
5OT7|1|4|C|2163
5OT7|1|4|C|2164
5OT7|1|4|G|2165
5OT7|1|4|G|2166
5OT7|1|4|U|2167
5OT7|1|4|G|2168
5OT7|1|4|A|2169
5OT7|1|4|A|2170
5OT7|1|4|A|2171
5OT7|1|4|U|2172
5OT7|1|4|A|2173
5OT7|1|4|C|2174
5OT7|1|4|C|2175
5OT7|1|4|A|2176
5OT7|1|4|C|2177

Current chains

Chain 4

23S Ribosomal RNA

Nearby chains

Chain 2

Transfer RNA; tRNA

Chain f

50S ribosomal protein L1