IL_5T2A_158
3D structure
- PDB id
- 5T2A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the Leishmania donovani 80S ribosome at 2.9 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAACG*CGAG
- Length
- 9 nucleotides
- Bulged bases
- 5T2A|1|B|C|1083
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2A|1|B|U|1080
5T2A|1|B|A|1081
5T2A|1|B|A|1082
5T2A|1|B|C|1083
5T2A|1|B|G|1084
*
5T2A|1|B|C|1100
5T2A|1|B|G|1101
5T2A|1|B|A|1102
5T2A|1|B|G|1103
Current chains
- Chain B
- LSU-beta
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain I
- eL18
- Chain S
- eL21
- Chain b
- eL29
- Chain r
- eL42
- Chain s
- uL18
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