IL_5T2A_199
3D structure
- PDB id
- 5T2A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the Leishmania donovani 80S ribosome at 2.9 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCAUGAG*CUGAAC
- Length
- 13 nucleotides
- Bulged bases
- 5T2A|1|H|G|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2A|1|H|G|35
5T2A|1|H|C|36
5T2A|1|H|A|37
5T2A|1|H|U|38
5T2A|1|H|G|39
5T2A|1|H|A|40
5T2A|1|H|G|41
*
5T2A|1|H|C|92
5T2A|1|H|U|93
5T2A|1|H|G|94
5T2A|1|H|A|95
5T2A|1|H|A|96
5T2A|1|H|C|97
Current chains
- Chain H
- srRNA4
Nearby chains
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- srRNA1
- Chain G
- Large subunit ribosomal RNA; LSU rRNA
- Chain W
- eL24
- Chain d
- uL3
- Chain f
- eL31
Coloring options: