IL_5T2A_221
3D structure
- PDB id
- 5T2A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the Leishmania donovani 80S ribosome at 2.9 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAUUUGAGCUGUGCAC*GCACGCACUGGUUUCUUC
- Length
- 35 nucleotides
- Bulged bases
- 5T2A|1|A|C|611, 5T2A|1|A|G|612, 5T2A|1|A|G|617
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2A|1|A|G|581
5T2A|1|A|U|582
5T2A|1|A|A|583
5T2A|1|A|U|584
5T2A|1|A|U|585
5T2A|1|A|U|586
5T2A|1|A|G|587
5T2A|1|A|A|588
5T2A|1|A|G|589
5T2A|1|A|C|590
5T2A|1|A|U|591
5T2A|1|A|G|592
5T2A|1|A|U|593
5T2A|1|A|G|594
5T2A|1|A|C|595
5T2A|1|A|A|596
5T2A|1|A|C|597
*
5T2A|1|A|G|608
5T2A|1|A|C|609
5T2A|1|A|A|610
5T2A|1|A|C|611
5T2A|1|A|G|612
5T2A|1|A|C|613
5T2A|1|A|A|614
5T2A|1|A|C|615
5T2A|1|A|U|616
5T2A|1|A|G|617
5T2A|1|A|G|618
5T2A|1|A|U|619
5T2A|1|A|U|620
5T2A|1|A|U|621
5T2A|1|A|C|622
5T2A|1|A|U|623
5T2A|1|A|U|624
5T2A|1|A|C|625
Current chains
- Chain A
- LSU-alpha
Nearby chains
- Chain S
- eL21
- Chain p
- uL4
- Chain u
- uL30
Coloring options: