IL_5T2A_226
3D structure
- PDB id
- 5T2A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the Leishmania donovani 80S ribosome at 2.9 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAACAAAUC*GCGCAUUAAAGCAAAAA
- Length
- 26 nucleotides
- Bulged bases
- 5T2A|1|E|C|190, 5T2A|1|E|A|195
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2A|1|E|U|28
5T2A|1|E|A|29
5T2A|1|E|A|30
5T2A|1|E|C|31
5T2A|1|E|A|32
5T2A|1|E|A|33
5T2A|1|E|A|34
5T2A|1|E|U|35
5T2A|1|E|C|36
*
5T2A|1|E|G|187
5T2A|1|E|C|188
5T2A|1|E|G|189
5T2A|1|E|C|190
5T2A|1|E|A|191
5T2A|1|E|U|192
5T2A|1|E|U|193
5T2A|1|E|A|194
5T2A|1|E|A|195
5T2A|1|E|A|196
5T2A|1|E|G|197
5T2A|1|E|C|198
5T2A|1|E|A|199
5T2A|1|E|A|200
5T2A|1|E|A|201
5T2A|1|E|A|202
5T2A|1|E|A|203
Current chains
- Chain E
- srRNA1
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
- Chain R
- eL19
- Chain c
- uL2
- Chain h
- eL34
- Chain m
- eL43
Coloring options: