IL_5T2C_037

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGCCACCCCUC*GCCCGGGGGAGGGGC

Length

26 nucleotides

Bulged bases

5T2C|1|A|C|1214

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|G|1074
5T2C|1|A|G|1075
5T2C|1|A|C|1076
5T2C|1|A|C|1077
5T2C|1|A|A|1078
5T2C|1|A|C|1079
5T2C|1|A|C|1080
5T2C|1|A|C|1081
5T2C|1|A|C|1082
5T2C|1|A|U|1083
5T2C|1|A|C|1084
*
5T2C|1|A|G|1213
5T2C|1|A|C|1214
5T2C|1|A|C|1215
5T2C|1|A|C|1216
5T2C|1|A|G|1217
5T2C|1|A|G|1218
5T2C|1|A|G|1219
5T2C|1|A|G|1220
5T2C|1|A|G|1221
5T2C|1|A|A|1222
5T2C|1|A|G|1232
5T2C|1|A|G|1233
5T2C|1|A|G|1234
5T2C|1|A|G|1235
5T2C|1|A|C|1236

Current chains

Chain A

28S rRNA

Nearby chains

Chain F

60S ribosomal protein L4

Chain H

60S ribosomal protein L6

Chain m

60S ribosomal protein L7