IL_5T2C_040

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGG*CCGUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|C|1357
5T2C|1|A|G|1358
5T2C|1|A|G|1359
5T2C|1|A|G|1360
*
5T2C|1|A|C|1378
5T2C|1|A|C|1379
5T2C|1|A|G|1380
5T2C|1|A|U|1381
5T2C|1|A|G|1382

Current chains

Chain A

28S rRNA

Nearby chains

Chain F

60S ribosomal protein L4

Chain U

60S ribosomal protein L27a

Chain r

60S ribosomal protein L13

Chain t

60S ribosomal protein L15