IL_5T2C_053
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUU*AUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T2C_053 not in the Motif Atlas
- Homologous match to IL_8C3A_037
- Geometric discrepancy: 0.1159
- The information below is about IL_8C3A_037
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
5T2C|1|A|U|1671
5T2C|1|A|U|1672
5T2C|1|A|U|1673
*
5T2C|1|A|A|1682
5T2C|1|A|U|1683
5T2C|1|A|A|1684
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain K
- 60S ribosomal protein L18
- Chain N
- 60S ribosomal protein L21
- Chain U
- 60S ribosomal protein L27a
- Chain V
- 60S ribosomal protein L29
- Chain r
- 60S ribosomal protein L13
Coloring options: