IL_5T2C_068

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUAUAGACAGCA*UGCCGAAU

Length

20 nucleotides

Bulged bases

5T2C|1|A|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|A|1956
5T2C|1|A|U|1957
5T2C|1|A|A|1958
5T2C|1|A|U|1959
5T2C|1|A|A|1960
5T2C|1|A|G|1961
5T2C|1|A|A|1962
5T2C|1|A|C|1963
5T2C|1|A|A|1964
5T2C|1|A|G|1965
5T2C|1|A|C|1966
5T2C|1|A|A|1967
*
5T2C|1|A|U|2020
5T2C|1|A|G|2021
5T2C|1|A|C|2022
5T2C|1|A|C|2023
5T2C|1|A|G|2024
5T2C|1|A|A|2025
5T2C|1|A|A|2026
5T2C|1|A|U|2027

Current chains

Chain A

28S rRNA

Nearby chains

Chain g

Ubiquitin-60S ribosomal protein L40