IL_5T2C_092

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGUCGG*CCGGCGCCUAGC

Length

19 nucleotides

Bulged bases

5T2C|1|A|G|2906, 5T2C|1|A|A|3596

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|G|2901
5T2C|1|A|G|2902
5T2C|1|A|G|2903
5T2C|1|A|U|2904
5T2C|1|A|C|2905
5T2C|1|A|G|2906
5T2C|1|A|G|2907
*
5T2C|1|A|C|3587
5T2C|1|A|C|3588
5T2C|1|A|G|3589
5T2C|1|A|G|3590
5T2C|1|A|C|3591
5T2C|1|A|G|3592
5T2C|1|A|C|3593
5T2C|1|A|C|3594
5T2C|1|A|U|3595
5T2C|1|A|A|3596
5T2C|1|A|G|3597
5T2C|1|A|C|3598

Current chains

Chain A

28S rRNA

Nearby chains

Chain Au

40S ribosomal protein S8

Chain Aw

40S ribosomal protein S11

Chain L

60S ribosomal protein L19