IL_5T2C_104

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGACAUG*UGAUCGUUU

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|A|3945
5T2C|1|A|G|3946
5T2C|1|A|A|3947
5T2C|1|A|C|3948
5T2C|1|A|A|3949
5T2C|1|A|U|3950
5T2C|1|A|G|3951
*
5T2C|1|A|U|4060
5T2C|1|A|G|4061
5T2C|1|A|A|4062
5T2C|1|A|U|4063
5T2C|1|A|C|4064
5T2C|1|A|G|4065
5T2C|1|A|U|4066
5T2C|1|A|U|4067
5T2C|1|A|U|4068

Current chains

Chain A

28S rRNA

Nearby chains

Chain Ap

40S ribosomal protein S3a

Chain c

60S ribosomal protein L36