IL_5T2C_155

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAGUG*CUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|C|223
5T2C|1|AA|A|224
5T2C|1|AA|G|225
5T2C|1|AA|U|287
5T2C|1|AA|G|288
*
5T2C|1|AA|C|295
5T2C|1|AA|U|296
5T2C|1|AA|A|297
5T2C|1|AA|G|298

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AK

40S ribosomal protein S6

Chain Ar

40S ribosomal protein S4, X isoform

Chain Au

40S ribosomal protein S8

Chain Aw

40S ribosomal protein S11