IL_5T2C_164

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGUGCCAG*CGGUAAUUCC

Length

18 nucleotides

Bulged bases

5T2C|1|AA|A|628

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|AA|G|610
5T2C|1|AA|G|611
5T2C|1|AA|U|612
5T2C|1|AA|G|613
5T2C|1|AA|C|614
5T2C|1|AA|C|615
5T2C|1|AA|A|616
5T2C|1|AA|G|617
*
5T2C|1|AA|C|624
5T2C|1|AA|G|625
5T2C|1|AA|G|626
5T2C|1|AA|U|627
5T2C|1|AA|A|628
5T2C|1|AA|A|629
5T2C|1|AA|U|630
5T2C|1|AA|U|631
5T2C|1|AA|C|632
5T2C|1|AA|C|633

Current chains

Chain AA

18S rRNA

Nearby chains

Chain AD

40S ribosomal protein S23

Chain AT

40S ribosomal protein S30

Chain Aq

40S ribosomal protein S3