IL_5T2C_213

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCCGUGUC*GACCGGCGAC

Length

18 nucleotides

Bulged bases

5T2C|1|A|G|666

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|G|488
5T2C|1|A|C|489
5T2C|1|A|C|490
5T2C|1|A|G|491
5T2C|1|A|U|492
5T2C|1|A|G|493
5T2C|1|A|U|494
5T2C|1|A|C|495
*
5T2C|1|A|G|659
5T2C|1|A|A|660
5T2C|1|A|C|661
5T2C|1|A|C|662
5T2C|1|A|G|663
5T2C|1|A|G|664
5T2C|1|A|C|665
5T2C|1|A|G|666
5T2C|1|A|A|667
5T2C|1|A|C|668

Current chains

Chain A

28S rRNA

Nearby chains

Chain F

60S ribosomal protein L4

Chain K

60S ribosomal protein L18

Chain k

60S ribosomal protein L28