IL_5T2C_217
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCUGGGAAGG*CAGCAGCACUCGC
- Length
- 23 nucleotides
- Bulged bases
- 5T2C|1|A|U|728, 5T2C|1|A|G|729, 5T2C|1|A|C|934, 5T2C|1|A|A|935, 5T2C|1|A|C|936, 5T2C|1|A|U|937
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|A|G|726
5T2C|1|A|C|727
5T2C|1|A|U|728
5T2C|1|A|G|729
5T2C|1|A|G|730
5T2C|1|A|G|731
5T2C|1|A|A|732
5T2C|1|A|A|733
5T2C|1|A|G|734
5T2C|1|A|G|735
*
5T2C|1|A|C|928
5T2C|1|A|A|929
5T2C|1|A|G|930
5T2C|1|A|C|931
5T2C|1|A|A|932
5T2C|1|A|G|933
5T2C|1|A|C|934
5T2C|1|A|A|935
5T2C|1|A|C|936
5T2C|1|A|U|937
5T2C|1|A|C|938
5T2C|1|A|G|939
5T2C|1|A|C|940
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L4
- Chain M
- 60S ribosomal protein L18a
- Chain m
- 60S ribosomal protein L7
- Chain s
- 60S ribosomal protein L14
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