IL_5T2C_229
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGGGGCGAGCCCCGAGGGGCUCUCGCUUCUGGCGCCAAG*CGAC
- Length
- 43 nucleotides
- Bulged bases
- 5T2C|1|A|G|4104, 5T2C|1|A|C|4116, 5T2C|1|A|U|4117, 5T2C|1|A|U|4118, 5T2C|1|A|C|4119, 5T2C|1|A|U|4120, 5T2C|1|A|G|4121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|A|G|4091
5T2C|1|A|G|4092
5T2C|1|A|G|4093
5T2C|1|A|G|4094
5T2C|1|A|G|4095
5T2C|1|A|C|4096
5T2C|1|A|G|4097
5T2C|1|A|A|4098
5T2C|1|A|G|4099
5T2C|1|A|C|4100
5T2C|1|A|C|4101
5T2C|1|A|C|4102
5T2C|1|A|C|4103
5T2C|1|A|G|4104
5T2C|1|A|A|4105
5T2C|1|A|G|4106
5T2C|1|A|G|4107
5T2C|1|A|G|4108
5T2C|1|A|G|4109
5T2C|1|A|C|4110
5T2C|1|A|U|4111
5T2C|1|A|C|4112
5T2C|1|A|U|4113
5T2C|1|A|C|4114
5T2C|1|A|G|4115
5T2C|1|A|C|4116
5T2C|1|A|U|4117
5T2C|1|A|U|4118
5T2C|1|A|C|4119
5T2C|1|A|U|4120
5T2C|1|A|G|4121
5T2C|1|A|G|4122
5T2C|1|A|C|4123
5T2C|1|A|G|4124
5T2C|1|A|C|4125
5T2C|1|A|C|4126
5T2C|1|A|A|4127
5T2C|1|A|A|4128
5T2C|1|A|G|4129
*
5T2C|1|A|C|4155
5T2C|1|A|G|4156
5T2C|1|A|A|4157
5T2C|1|A|C|4158
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L8
- Chain R
- 60S ribosomal protein L23a
- Chain T
- 60S ribosomal protein L27
- Chain W
- 60S ribosomal protein L30
- Chain a
- 60S ribosomal protein L34
- Chain j
- 60S ribosomal protein L37a
- Chain n
- 60S ribosomal protein L7a
Coloring options: