IL_5T2C_231
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCCUCGGAUAG*UGCGGAGUGC
- Length
- 21 nucleotides
- Bulged bases
- 5T2C|1|A|C|4756, 5T2C|1|A|C|4757, 5T2C|1|A|U|4763, 5T2C|1|A|C|4871, 5T2C|1|A|G|4872, 5T2C|1|A|A|4874, 5T2C|1|A|G|4877
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|A|G|4755
5T2C|1|A|C|4756
5T2C|1|A|C|4757
5T2C|1|A|U|4758
5T2C|1|A|C|4759
5T2C|1|A|G|4760
5T2C|1|A|G|4761
5T2C|1|A|A|4762
5T2C|1|A|U|4763
5T2C|1|A|A|4764
5T2C|1|A|G|4765
*
5T2C|1|A|U|4869
5T2C|1|A|G|4870
5T2C|1|A|C|4871
5T2C|1|A|G|4872
5T2C|1|A|G|4873
5T2C|1|A|A|4874
5T2C|1|A|G|4875
5T2C|1|A|U|4876
5T2C|1|A|G|4877
5T2C|1|A|C|4878
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain H
- 60S ribosomal protein L6
- Chain I
- 60S ribosomal protein L13a
- Chain M
- 60S ribosomal protein L18a
- Chain o
- 60S ribosomal protein L9
- Chain s
- 60S ribosomal protein L14
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