IL_5T2C_232

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAACGG*CCUCGC

Length

13 nucleotides

Bulged bases

5T2C|1|A|U|4925, 5T2C|1|A|C|4926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|A|G|4891
5T2C|1|A|A|4892
5T2C|1|A|A|4893
5T2C|1|A|A|4894
5T2C|1|A|C|4895
5T2C|1|A|G|4896
5T2C|1|A|G|4897
*
5T2C|1|A|C|4923
5T2C|1|A|C|4924
5T2C|1|A|U|4925
5T2C|1|A|C|4926
5T2C|1|A|G|4927
5T2C|1|A|C|4928

Current chains

Chain A

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L6

Chain I

60S ribosomal protein L13a

Chain s

60S ribosomal protein L14