IL_5T2C_249
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCAG*CCAGUAAGUGCGGGUCAUAAGCUUGCGUUGAUUAAG
- Length
- 40 nucleotides
- Bulged bases
- 5T2C|1|AA|A|1663, 5T2C|1|AA|G|1665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|AA|C|1218
5T2C|1|AA|C|1219
5T2C|1|AA|A|1220
5T2C|1|AA|G|1221
*
5T2C|1|AA|C|1645
5T2C|1|AA|C|1646
5T2C|1|AA|A|1647
5T2C|1|AA|G|1648
5T2C|1|AA|U|1649
5T2C|1|AA|A|1650
5T2C|1|AA|A|1651
5T2C|1|AA|G|1652
5T2C|1|AA|U|1653
5T2C|1|AA|G|1654
5T2C|1|AA|C|1655
5T2C|1|AA|G|1656
5T2C|1|AA|G|1657
5T2C|1|AA|G|1658
5T2C|1|AA|U|1659
5T2C|1|AA|C|1660
5T2C|1|AA|A|1661
5T2C|1|AA|U|1662
5T2C|1|AA|A|1663
5T2C|1|AA|A|1664
5T2C|1|AA|G|1665
5T2C|1|AA|C|1666
5T2C|1|AA|U|1667
5T2C|1|AA|U|1668
5T2C|1|AA|G|1669
5T2C|1|AA|C|1670
5T2C|1|AA|G|1671
5T2C|1|AA|U|1672
5T2C|1|AA|U|1673
5T2C|1|AA|G|1674
5T2C|1|AA|A|1675
5T2C|1|AA|U|1676
5T2C|1|AA|U|1677
5T2C|1|AA|A|1678
5T2C|1|AA|A|1679
5T2C|1|AA|G|1680
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain AB
- 40S ribosomal protein S20
- Chain AF
- 40S ribosomal protein S28
- Chain AG
- 40S ribosomal protein S29
- Chain AU
- 40S ribosomal protein S19
- Chain An
- Transfer RNA; tRNA
- Chain As
- 40S ribosomal protein S5
- Chain Ay
- 40S ribosomal protein S16
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