IL_5T2C_252
3D structure
- PDB id
- 5T2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human ribosome at 3.6 Angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGCUCAGCGUG*CCGUUGAACCCC
- Length
- 23 nucleotides
- Bulged bases
- 5T2C|1|AA|U|1585, 5T2C|1|AA|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T2C|1|AA|G|1540
5T2C|1|AA|G|1541
5T2C|1|AA|C|1542
5T2C|1|AA|U|1543
5T2C|1|AA|C|1544
5T2C|1|AA|A|1545
5T2C|1|AA|G|1546
5T2C|1|AA|C|1547
5T2C|1|AA|G|1548
5T2C|1|AA|U|1549
5T2C|1|AA|G|1550
*
5T2C|1|AA|C|1582
5T2C|1|AA|C|1583
5T2C|1|AA|G|1584
5T2C|1|AA|U|1585
5T2C|1|AA|U|1586
5T2C|1|AA|G|1587
5T2C|1|AA|A|1588
5T2C|1|AA|A|1589
5T2C|1|AA|C|1590
5T2C|1|AA|C|1591
5T2C|1|AA|C|1592
5T2C|1|AA|C|1593
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain AB
- 40S ribosomal protein S20
- Chain AG
- 40S ribosomal protein S29
- Chain AR
- 40S ribosomal protein S25
- Chain AU
- 40S ribosomal protein S19
- Chain Aq
- 40S ribosomal protein S3
- Chain As
- 40S ribosomal protein S5
- Chain Ay
- 40S ribosomal protein S16
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