IL_5T2C_258

3D structure

PDB id

5T2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of the human ribosome at 3.6 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAG*CUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T2C_258 not in the Motif Atlas

Homologous match to IL_5EL4_358

Geometric discrepancy: 0.2657

The information below is about IL_5EL4_358

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T2C|1|An|G|6
5T2C|1|An|A|7
5T2C|1|An|G|8
*
5T2C|1|An|C|66
5T2C|1|An|U|67
5T2C|1|An|C|68

Current chains

Chain An

tRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain i

60S ribosomal protein L36a