IL_5T7V_015

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAAG*CUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_015 not in the Motif Atlas

Homologous match to IL_6CZR_136

Geometric discrepancy: 0.289

The information below is about IL_6CZR_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05564.3

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

14

Unit IDs

5T7V|1|A|U|602
5T7V|1|A|A|603
5T7V|1|A|A|604
5T7V|1|A|G|605
*
5T7V|1|A|C|651
5T7V|1|A|U|652
5T7V|1|A|G|653

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain S8

30S ribosomal protein S17

Chain SF

30S ribosomal protein S8