IL_5T7V_030

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGGU*ACACA

Length

9 nucleotides

Bulged bases

5T7V|1|A|A|1237

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_030 not in the Motif Atlas

Geometric match to IL_6JDV_002

Geometric discrepancy: 0.3505

The information below is about IL_6JDV_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

5T7V|1|A|U|961
5T7V|1|A|G|962
5T7V|1|A|G|963
5T7V|1|A|U|964
*
5T7V|1|A|A|1235
5T7V|1|A|C|1236
5T7V|1|A|A|1237
5T7V|1|A|C|1238
5T7V|1|A|A|1239

Current chains

Chain A

16S ribosomal RNA

Nearby chains