IL_5T7V_037

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUAAC*GGGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_037 not in the Motif Atlas

Geometric match to IL_5TBW_121

Geometric discrepancy: 0.2864

The information below is about IL_5TBW_121

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

5T7V|1|A|G|1433
5T7V|1|A|U|1434
5T7V|1|A|A|1435
5T7V|1|A|A|1436
5T7V|1|A|C|1437
*
5T7V|1|A|G|1484
5T7V|1|A|G|1485
5T7V|1|A|G|1486
5T7V|1|A|A|1487
5T7V|1|A|C|1488

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain B

Large subunit ribosomal RNA; LSU rRNA

Chain LN

50S ribosomal protein L14

Chain S3

30S ribosomal protein S12