IL_5T7V_038
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T7V_038 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.2569
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_97631.1
- Basepair signature
- cWW-L-R-L-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
5T7V|1|A|C|1440
5T7V|1|A|C|1441
5T7V|1|A|G|1442
5T7V|1|A|A|1443
5T7V|1|A|A|1444
5T7V|1|A|G|1445
*
5T7V|1|A|C|1477
5T7V|1|A|G|1478
5T7V|1|A|A|1479
5T7V|1|A|A|1480
5T7V|1|A|G|1481
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
- Chain L1
- 50S ribosomal protein L19
- Chain LN
- 50S ribosomal protein L14
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