IL_5T7V_058

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUGAAG*UGGAGGA

Length

13 nucleotides

Bulged bases

5T7V|1|B|G|774

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_058 not in the Motif Atlas

Geometric match to IL_4LFB_055

Geometric discrepancy: 0.296

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

5T7V|1|B|U|747
5T7V|1|B|U|748
5T7V|1|B|G|749
5T7V|1|B|A|750
5T7V|1|B|A|751
5T7V|1|B|G|752
*
5T7V|1|B|U|769
5T7V|1|B|G|770
5T7V|1|B|G|771
5T7V|1|B|A|772
5T7V|1|B|G|773
5T7V|1|B|G|774
5T7V|1|B|A|775

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain L2

50S ribosomal protein L2