IL_5T7V_072
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAAAAG*CGAAAAUGUACCGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 5T7V|1|B|A|1171, 5T7V|1|B|U|1174
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T7V_072 not in the Motif Atlas
- Geometric match to IL_4WF9_040
- Geometric discrepancy: 0.1249
- The information below is about IL_4WF9_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.3
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
5T7V|1|B|G|1068
5T7V|1|B|G|1069
5T7V|1|B|A|1070
5T7V|1|B|A|1071
5T7V|1|B|A|1072
5T7V|1|B|A|1073
5T7V|1|B|G|1074
*
5T7V|1|B|C|1168
5T7V|1|B|G|1169
5T7V|1|B|A|1170
5T7V|1|B|A|1171
5T7V|1|B|A|1172
5T7V|1|B|A|1173
5T7V|1|B|U|1174
5T7V|1|B|G|1175
5T7V|1|B|U|1176
5T7V|1|B|A|1177
5T7V|1|B|C|1178
5T7V|1|B|C|1179
5T7V|1|B|G|1180
5T7V|1|B|G|1181
5T7V|1|B|G|1182
5T7V|1|B|G|1183
5T7V|1|B|C|1184
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain C
- 5S ribosomal RNA; 5S rRNA
- Chain LC
- 50S ribosomal protein L3
- Chain LI
- 50S ribosomal protein L36
- Chain LM
- 50S ribosomal protein L13
- Chain LP
- 50S ribosomal protein L16
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