IL_5T7V_087

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAUG*CUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_087 not in the Motif Atlas

Homologous match to IL_4WF9_054

Geometric discrepancy: 0.2173

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

5T7V|1|B|C|1461
5T7V|1|B|G|1462
5T7V|1|B|A|1463
5T7V|1|B|U|1464
5T7V|1|B|G|1465
*
5T7V|1|B|C|1624
5T7V|1|B|U|1625
5T7V|1|B|A|1626
5T7V|1|B|G|1627

Current chains

Chain B

23S ribosomal RNA

Nearby chains