IL_5T7V_119

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_119 not in the Motif Atlas

Homologous match to IL_4WF9_087

Geometric discrepancy: 0.1453

The information below is about IL_4WF9_087

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.1

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

44

Unit IDs

5T7V|1|B|C|2377
5T7V|1|B|G|2378
5T7V|1|B|A|2379
5T7V|1|B|G|2380
*
5T7V|1|B|C|2391
5T7V|1|B|G|2392
5T7V|1|B|A|2393
5T7V|1|B|G|2394

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain L9

50S ribosomal protein L27

Chain LH

50S ribosomal protein L35