IL_5T7V_143
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAUGA*UAUCC
- Length
- 11 nucleotides
- Bulged bases
- 5T7V|1|A|G|32
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T7V_143 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.3702
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
5T7V|1|A|G|28
5T7V|1|A|G|29
5T7V|1|A|A|30
5T7V|1|A|U|31
5T7V|1|A|G|32
5T7V|1|A|A|33
*
5T7V|1|A|U|560
5T7V|1|A|A|561
5T7V|1|A|U|562
5T7V|1|A|C|563
5T7V|1|A|C|564
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain S3
- 30S ribosomal protein S12
- Chain SC
- 30S ribosomal protein S4
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