IL_5T7V_174
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCGUUGAAG*UGGAGC
- Length
- 15 nucleotides
- Bulged bases
- 5T7V|1|B|U|1249
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T7V_174 not in the Motif Atlas
- Geometric match to IL_6HCT_001
- Geometric discrepancy: 0.3538
- The information below is about IL_6HCT_001
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_64900.1
- Basepair signature
- cWW-cWW-tSS-tSH-L-tHS-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
5T7V|1|B|G|1245
5T7V|1|B|C|1246
5T7V|1|B|G|1247
5T7V|1|B|U|1248
5T7V|1|B|U|1249
5T7V|1|B|G|1250
5T7V|1|B|A|1251
5T7V|1|B|A|1252
5T7V|1|B|G|1253
*
5T7V|1|B|U|1272
5T7V|1|B|G|1273
5T7V|1|B|G|1274
5T7V|1|B|A|1275
5T7V|1|B|G|1276
5T7V|1|B|C|1277
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain L3
- 50S ribosomal protein L20
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