IL_5T7V_210

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUG*UUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5T7V_210 not in the Motif Atlas

Homologous match to IL_4WF9_018

Geometric discrepancy: 0.1718

The information below is about IL_4WF9_018

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

5T7V|1|B|U|638
5T7V|1|B|U|639
5T7V|1|B|G|640
*
5T7V|1|B|U|705
5T7V|1|B|U|706
5T7V|1|B|G|707

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain LH

50S ribosomal protein L35

Chain LJ

50S ribosomal protein L4

Chain LO

50S ribosomal protein L15