IL_5T7V_221
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 5T7V|1|B|G|2807
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5T7V_221 not in the Motif Atlas
- Homologous match to IL_4WF9_099
- Geometric discrepancy: 0.1385
- The information below is about IL_4WF9_099
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.3
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
5T7V|1|B|U|2663
5T7V|1|B|U|2664
5T7V|1|B|G|2665
5T7V|1|B|A|2666
5T7V|1|B|G|2667
*
5T7V|1|B|C|2801
5T7V|1|B|A|2802
5T7V|1|B|A|2803
5T7V|1|B|G|2804
5T7V|1|B|A|2805
5T7V|1|B|U|2806
5T7V|1|B|G|2807
5T7V|1|B|A|2808
5T7V|1|B|G|2809
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain LC
- 50S ribosomal protein L3
- Chain LM
- 50S ribosomal protein L13
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