IL_5TBW_276
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GCGAAU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 5TBW|1|AR|G|1001
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TBW_276 not in the Motif Atlas
- Homologous match to IL_5TBW_040
- Geometric discrepancy: 0.0618
- The information below is about IL_5TBW_040
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_02509.3
- Basepair signature
- cWW-cWS-cWW-cWW-R-cSH-tWH-R
- Number of instances in this motif group
- 6
Unit IDs
5TBW|1|AR|G|999
5TBW|1|AR|C|1000
5TBW|1|AR|G|1001
5TBW|1|AR|A|1002
5TBW|1|AR|A|1003
5TBW|1|AR|U|1004
*
5TBW|1|AR|A|1046
5TBW|1|AR|A|1047
5TBW|1|AR|A|1048
5TBW|1|AR|C|1049
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain AS
- 5S ribosomal RNA; 5S rRNA
- Chain CG
- 60S ribosomal protein L5
- Chain CL
- 60S ribosomal protein L10
- Chain CV
- 60S ribosomal protein L21-A
Coloring options: