IL_5TBW_510
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GCCAGCGA*UUGUGAAAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TBW_510 not in the Motif Atlas
- Homologous match to IL_8P9A_448
- Geometric discrepancy: 0.1202
- The information below is about IL_8P9A_448
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_91698.1
- Basepair signature
- cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5TBW|1|A|G|1480
5TBW|1|A|C|1481
5TBW|1|A|C|1482
5TBW|1|A|A|1483
5TBW|1|A|G|1484
5TBW|1|A|C|1485
5TBW|1|A|G|1486
5TBW|1|A|A|1487
*
5TBW|1|A|U|1519
5TBW|1|A|U|1520
5TBW|1|A|G|1521
5TBW|1|A|U|1522
5TBW|1|A|G|1523
5TBW|1|A|A|1524
5TBW|1|A|A|1525
5TBW|1|A|A|1526
5TBW|1|A|C|1527
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein S3
- Chain G
- 40S ribosomal protein S5
- Chain R
- 40S ribosomal protein S16-A
- Chain U
- 40S ribosomal protein S19-A
- Chain V
- 40S ribosomal protein S20
- Chain e
- 40S ribosomal protein S29-A
Coloring options: