IL_5TCU_008

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAC*GAUAAUAUAGUGAAAGACAC

Length

23 nucleotides

Bulged bases

5TCU|1|A|A|211

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|G|142
5TCU|1|A|A|143
5TCU|1|A|C|144
*
5TCU|1|A|G|178
5TCU|1|A|A|179
5TCU|1|A|U|180
5TCU|1|A|A|181
5TCU|1|A|A|182
5TCU|1|A|U|183
5TCU|1|A|A|184
5TCU|1|A|U|185
5TCU|1|A|A|206
5TCU|1|A|G|207
5TCU|1|A|U|208
5TCU|1|A|G|209
5TCU|1|A|A|210
5TCU|1|A|A|211
5TCU|1|A|A|212
5TCU|1|A|G|213
5TCU|1|A|A|214
5TCU|1|A|C|215
5TCU|1|A|A|228
5TCU|1|A|C|229

Current chains

Chain A

16S RRNA

Nearby chains

Chain SA

30S ribosomal protein S20