IL_5TCU_027

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAAGAG*UGGUC

Length

11 nucleotides

Bulged bases

5TCU|1|A|A|673

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|G|669
5TCU|1|A|A|670
5TCU|1|A|A|671
5TCU|1|A|G|672
5TCU|1|A|A|673
5TCU|1|A|G|674
*
5TCU|1|A|U|748
5TCU|1|A|G|749
5TCU|1|A|G|750
5TCU|1|A|U|751
5TCU|1|A|C|752

Current chains

Chain A

16S RRNA

Nearby chains

Chain S6

30S ribosomal protein S15

Chain S9

30S ribosomal protein S18

Chain SE

30S ribosomal protein S6