IL_5TCU_029

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AUGUGUAG*CGCAGAGAUAU

Length

19 nucleotides

Bulged bases

5TCU|1|A|A|710

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|A|689
5TCU|1|A|U|690
5TCU|1|A|G|691
5TCU|1|A|U|692
5TCU|1|A|G|693
5TCU|1|A|U|694
5TCU|1|A|A|695
5TCU|1|A|G|696
*
5TCU|1|A|C|707
5TCU|1|A|G|708
5TCU|1|A|C|709
5TCU|1|A|A|710
5TCU|1|A|G|711
5TCU|1|A|A|712
5TCU|1|A|G|713
5TCU|1|A|A|714
5TCU|1|A|U|715
5TCU|1|A|A|716
5TCU|1|A|U|717

Current chains

Chain A

16S RRNA

Nearby chains

Chain B

Large subunit ribosomal RNA; LSU rRNA

Chain S2

30S ribosomal protein S11

Chain SE

30S ribosomal protein S6