IL_5TCU_036

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

5TCU|1|A|A|1238

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5TCU_036 not in the Motif Atlas

Homologous match to IL_6CZR_150

Geometric discrepancy: 0.3038

The information below is about IL_6CZR_150

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|G|963
5TCU|1|A|G|964
*
5TCU|1|A|C|1237
5TCU|1|A|A|1238
5TCU|1|A|C|1239

Current chains

Chain A

16S RRNA

Nearby chains

Chain E

Transfer RNA; tRNA

Chain S4

30S ribosomal protein S13

Chain SI

30S ribosomal protein S19