IL_5TCU_045

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UAGUUGCC*GGCACUCUAA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|U|1134
5TCU|1|A|A|1135
5TCU|1|A|G|1136
5TCU|1|A|U|1137
5TCU|1|A|U|1138
5TCU|1|A|G|1139
5TCU|1|A|C|1140
5TCU|1|A|C|1141
*
5TCU|1|A|G|1154
5TCU|1|A|G|1155
5TCU|1|A|C|1156
5TCU|1|A|A|1157
5TCU|1|A|C|1158
5TCU|1|A|U|1159
5TCU|1|A|C|1160
5TCU|1|A|U|1161
5TCU|1|A|A|1162
5TCU|1|A|A|1163

Current chains

Chain A

16S RRNA

Nearby chains

Chain S1

30S ribosomal protein S10

Chain SH

30S ribosomal protein S9