IL_5TCU_047

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCAG*CAAUC

Length

9 nucleotides

Bulged bases

5TCU|1|A|C|1267, 5TCU|1|A|A|1291

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|G|1266
5TCU|1|A|C|1267
5TCU|1|A|A|1268
5TCU|1|A|G|1269
*
5TCU|1|A|C|1288
5TCU|1|A|A|1290
5TCU|1|A|A|1291
5TCU|1|A|U|1292
5TCU|1|A|C|1293

Current chains

Chain A

16S RRNA

Nearby chains

Chain S1

30S ribosomal protein S10

Chain S5

30S ribosomal protein S14 type Z

Chain SB

30S ribosomal protein S3