IL_5TCU_148

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUCA*UACGCGAG

Length

12 nucleotides

Bulged bases

5TCU|1|B|A|2599, 5TCU|1|B|C|2600, 5TCU|1|B|G|2603, 5TCU|1|B|A|2604

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|C|2537
5TCU|1|B|U|2538
5TCU|1|B|C|2539
5TCU|1|B|A|2540
*
5TCU|1|B|U|2598
5TCU|1|B|A|2599
5TCU|1|B|C|2600
5TCU|1|B|G|2601
5TCU|1|B|C|2602
5TCU|1|B|G|2603
5TCU|1|B|A|2604
5TCU|1|B|G|2605

Current chains

Chain B

23S RRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LE

50S ribosomal protein L32