IL_5TCU_162
3D structure
- PDB id
- 5TCU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin sensitive Staphylococcus aureus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- ACUAUAGCA*UAGCGACGAUGGUAGCCAACUUACGUUCCGCUAGAGUAGAACGUU
- Length
- 54 nucleotides
- Bulged bases
- 5TCU|1|C|U|10, 5TCU|1|C|U|12, 5TCU|1|C|G|87
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TCU|1|C|A|8
5TCU|1|C|C|9
5TCU|1|C|U|10
5TCU|1|C|A|11
5TCU|1|C|U|12
5TCU|1|C|A|13
5TCU|1|C|G|14
5TCU|1|C|C|15
5TCU|1|C|A|16
*
5TCU|1|C|U|63
5TCU|1|C|A|64
5TCU|1|C|G|65
5TCU|1|C|C|66
5TCU|1|C|G|67
5TCU|1|C|A|68
5TCU|1|C|C|69
5TCU|1|C|G|70
5TCU|1|C|A|71
5TCU|1|C|U|72
5TCU|1|C|G|73
5TCU|1|C|G|74
5TCU|1|C|U|75
5TCU|1|C|A|76
5TCU|1|C|G|77
5TCU|1|C|C|78
5TCU|1|C|C|79
5TCU|1|C|A|80
5TCU|1|C|A|81
5TCU|1|C|C|82
5TCU|1|C|U|83
5TCU|1|C|U|84
5TCU|1|C|A|85
5TCU|1|C|C|86
5TCU|1|C|G|87
5TCU|1|C|U|88
5TCU|1|C|U|89
5TCU|1|C|C|90
5TCU|1|C|C|91
5TCU|1|C|G|92
5TCU|1|C|C|93
5TCU|1|C|U|94
5TCU|1|C|A|95
5TCU|1|C|G|96
5TCU|1|C|A|97
5TCU|1|C|G|98
5TCU|1|C|U|99
5TCU|1|C|A|100
5TCU|1|C|G|101
5TCU|1|C|A|102
5TCU|1|C|A|103
5TCU|1|C|C|104
5TCU|1|C|G|105
5TCU|1|C|U|106
5TCU|1|C|U|107
Current chains
- Chain C
- 5S rRNA CHAIN
Nearby chains
- Chain B
- Large subunit ribosomal RNA; LSU rRNA
- Chain L8
- 50S ribosomal protein L25
- Chain L9
- 50S ribosomal protein L27
- Chain LD
- 50S ribosomal protein L30
- Chain LP
- 50S ribosomal protein L16
- Chain LR
- 50S ribosomal protein L18
Coloring options: