IL_5TCU_174

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGCAUGG*UCAUCAUGC

Length

17 nucleotides

Bulged bases

5TCU|1|A|C|1066, 5TCU|1|A|A|1212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|A|G|1063
5TCU|1|A|U|1064
5TCU|1|A|G|1065
5TCU|1|A|C|1066
5TCU|1|A|A|1067
5TCU|1|A|U|1068
5TCU|1|A|G|1069
5TCU|1|A|G|1070
*
5TCU|1|A|U|1210
5TCU|1|A|C|1211
5TCU|1|A|A|1212
5TCU|1|A|U|1213
5TCU|1|A|C|1214
5TCU|1|A|A|1215
5TCU|1|A|U|1216
5TCU|1|A|G|1217
5TCU|1|A|C|1218

Current chains

Chain A

16S RRNA

Nearby chains

Chain S1

30S ribosomal protein S10

Chain S5

30S ribosomal protein S14 type Z

Chain SB

30S ribosomal protein S3