IL_5TCU_190

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAGGAAG*CGCUC

Length

12 nucleotides

Bulged bases

5TCU|1|B|G|1369

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|G|1354
5TCU|1|B|A|1355
5TCU|1|B|G|1356
5TCU|1|B|G|1357
5TCU|1|B|A|1358
5TCU|1|B|A|1359
5TCU|1|B|G|1360
*
5TCU|1|B|C|1368
5TCU|1|B|G|1369
5TCU|1|B|C|1370
5TCU|1|B|U|1371
5TCU|1|B|C|1372

Current chains

Chain B

23S RRNA

Nearby chains

Chain L5

50S ribosomal protein L22

Chain L6

50S ribosomal protein L23