IL_5TCU_194

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGCUG*CAGUAAAC

Length

14 nucleotides

Bulged bases

5TCU|1|B|A|1927

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|G|1867
5TCU|1|B|U|1868
5TCU|1|B|G|1869
5TCU|1|B|C|1870
5TCU|1|B|U|1871
5TCU|1|B|G|1872
*
5TCU|1|B|C|1922
5TCU|1|B|A|1923
5TCU|1|B|G|1924
5TCU|1|B|U|1925
5TCU|1|B|A|1926
5TCU|1|B|A|1927
5TCU|1|B|A|1928
5TCU|1|B|C|1929

Current chains

Chain B

23S RRNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain L2

50S ribosomal protein L2