IL_5TCU_196

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGCGACAGGA*UCCGUCGUG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|C|2072
5TCU|1|B|G|2073
5TCU|1|B|C|2074
5TCU|1|B|G|2075
5TCU|1|B|A|2076
5TCU|1|B|C|2077
5TCU|1|B|A|2078
5TCU|1|B|G|2079
5TCU|1|B|G|2080
5TCU|1|B|A|2081
*
5TCU|1|B|U|2642
5TCU|1|B|C|2643
5TCU|1|B|C|2644
5TCU|1|B|G|2645
5TCU|1|B|U|2646
5TCU|1|B|C|2647
5TCU|1|B|G|2648
5TCU|1|B|U|2649
5TCU|1|B|G|2650

Current chains

Chain B

23S RRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LE

50S ribosomal protein L32

Chain LM

50S ribosomal protein L13