IL_5TCU_202

3D structure

PDB id

5TCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin sensitive Staphylococcus aureus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGUGUACCAG*CUGGGUAGCU

Length

20 nucleotides

Bulged bases

5TCU|1|B|U|2716, 5TCU|1|B|A|2717

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TCU|1|B|G|2712
5TCU|1|B|G|2713
5TCU|1|B|U|2714
5TCU|1|B|G|2715
5TCU|1|B|U|2716
5TCU|1|B|A|2717
5TCU|1|B|C|2718
5TCU|1|B|C|2719
5TCU|1|B|A|2720
5TCU|1|B|G|2721
*
5TCU|1|B|C|2742
5TCU|1|B|U|2743
5TCU|1|B|G|2744
5TCU|1|B|G|2745
5TCU|1|B|G|2746
5TCU|1|B|U|2747
5TCU|1|B|A|2748
5TCU|1|B|G|2749
5TCU|1|B|C|2750
5TCU|1|B|U|2751

Current chains

Chain B

23S RRNA

Nearby chains

Chain L1

50S ribosomal protein L19

Chain LC

50S ribosomal protein L3

Chain LN

50S ribosomal protein L14

Chain LQ

50S ribosomal protein L17